Top cofit genes for mRNA_2533 from Rhodosporidium toruloides IFO0880

mRNA_2533 10901 : K10706 SETX, ALS4 senataxin

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
2 mRNA_7471 15839 K00838 ARO8 aromatic amino acid aminotransferase I no 0.79
3 mRNA_2502 10870 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.78
4 mRNA_1232 9600 K12177 COPS3, CSN3 COP9 signalosome complex subunit 3 no 0.77
5 mRNA_2982 11350 Hypothetical Protein no 0.77
6 mRNA_665 9033 K08853 AAK AP2-associated kinase no 0.76
7 mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 no 0.76
8 mRNA_4983 13351 SUPERFAMILY--SSF48371 no 0.75
9 mRNA_6324 14692 Hypothetical Protein no 0.75
10 mRNA_7476 15844 K07243 FTR, FTH1, efeU high-affinity iron transporter no 0.73
11 mRNA_5196 13564 K17218 sqr sulfide-quinone oxidoreductase no 0.73
12 mRNA_3829 12197 KOG0519 Sensory transduction histidine kinase no 0.72
13 mRNA_3967 12335 KOG1972 Uncharacterized conserved protein no 0.72
14 mRNA_3663 12031 K01738 cysK cysteine synthase A no 0.72
15 mRNA_2230 10598 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 no 0.72
16 mRNA_3706 12074 KOG1550 Extracellular protein SEL-1 and related proteins no 0.72
17 mRNA_3225 11593 KOG0951 RNA helicase BRR2, DEAD-box superfamily no 0.71
18 mRNA_2581 10949 K06096 VAPA vesicle-associated membrane protein-associated protein A no 0.70
19 mRNA_319 8687 KOG2134 Polynucleotide kinase 3' phosphatase no 0.70
20 mRNA_7518 15886 KOG2641 Predicted seven transmembrane receptor - rhodopsin family no 0.69