Top cofit genes for mRNA_2453 from Rhodosporidium toruloides IFO0880

mRNA_2453 10821 : HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_185 8553 K11874 UBP16 ubiquitin carboxyl-terminal hydrolase 16 no 0.80
2 mRNA_7786 16154 HMMPfam-Centromere-associated protein K-PF11802 no 0.68
3 mRNA_6870 15238 K08736 MSH3 DNA mismatch repair protein MSH3 no 0.68
4 mRNA_6897 15265 Hypothetical Protein no 0.66
5 mRNA_3207 11575 Hypothetical Protein no 0.64
6 mRNA_204 8572 Hypothetical Protein no 0.61
7 mRNA_5152 13520 HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281 no 0.61
8 mRNA_2535 10903 Hypothetical Protein no 0.61
9 mRNA_5896 14264 K07573 CSL4, EXOSC1 exosome complex component CSL4 no 0.61
10 mRNA_2989 11357 SUPERFAMILY--SSF103473 no 0.60
11 mRNA_7571 15939 K11450 KDM1A, AOF2, LSD1 lysine-specific histone demethylase 1A no 0.60
12 mRNA_3101 11469 K01490 AMPD AMP deaminase no 0.60
13 mRNA_8171 16539 HMMPfam-DnaJ domain-PF00226,ProSiteProfiles-dnaJ domain profile.-PS50076,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565 no 0.60
14 mRNA_7230 15598 K07019 K07019 uncharacterized protein no 0.59
15 mRNA_2344 10712 Hypothetical Protein no 0.59
16 mRNA_4191 12559 HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781 no 0.59
17 mRNA_133 8501 Hypothetical Protein no 0.58
18 mRNA_3828 12196 Hypothetical Protein no 0.58
19 mRNA_2191 10559 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 no 0.58
20 mRNA_8163 16531 HMMPfam-Domain of unknown function (DUF4505)-PF14956 no 0.58