Top cofit genes for mRNA_2294 from Rhodosporidium toruloides IFO0880

mRNA_2294 10662 : KOG4131 Ngg1-interacting factor 3 protein NIF3L1

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3536 11904 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 no 0.79
2 mRNA_1649 10017 KOG2495 NADH-dehydrogenase (ubiquinone) no 0.77
3 mRNA_3105 11473 KOG1515 Arylacetamide deacetylase no 0.77
4 mRNA_7090 15458 Hypothetical Protein no 0.77
5 mRNA_8472 16840 KOG1769 Ubiquitin-like proteins no 0.76
6 mRNA_6485 14853 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase no 0.74
7 mRNA_1338 9706 SUPERFAMILY--SSF52047 no 0.73
8 mRNA_4493 12861 SUPERFAMILY--SSF52047 no 0.71
9 mRNA_2087 10455 K19792 FET4 low-affinity ferrous iron transport protein no 0.71
10 mRNA_2366 10734 HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284 no 0.71
11 mRNA_4481 12849 Hypothetical Protein no 0.69
12 mRNA_7583 15951 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.68
13 mRNA_2154 10522 KOG2689 Predicted ubiquitin regulatory protein no 0.68
14 mRNA_7707 16075 HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098 no 0.68
15 mRNA_5626 13994 KOG1611 Predicted short chain-type dehydrogenase no 0.68
16 mRNA_6903 15271 Hypothetical Protein no 0.68
17 mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial no 0.67
18 mRNA_5122 13490 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.67
19 mRNA_7300 15668 SUPERFAMILY--SSF47823 no 0.67
20 mRNA_4770 13138 KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference no 0.67