Top cofit genes for mRNA_2201 from Rhodosporidium toruloides IFO0880

mRNA_2201 10569 : K03005 RPA49, POLR1E DNA-directed RNA polymerase I subunit RPA49

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5443 13811 KOG3085 Predicted hydrolase (HAD superfamily) no 0.74
2 mRNA_5850 14218 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 no 0.73
3 mRNA_8483 16851 BLAST GA28568 gene product from transcript GA28568-RA [Rhiz... no 0.70
4 mRNA_7768 16136 SUPERFAMILY--SSF52058 no 0.69
5 mRNA_1392 9760 HMMPfam-DASH complex subunit Dam1-PF08653 no 0.68
6 mRNA_4231 12599 KOG4476 Gluconate transport-inducing protein no 0.68
7 mRNA_6625 14993 KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins no 0.67
8 mRNA_1661 10029 K13979 yahK uncharacterized zinc-type alcohol dehydrogenase-like protein no 0.65
9 mRNA_7668 16036 K18042 STYX serine/threonine/tyrosine-interacting protein no 0.65
10 mRNA_6622 14990 Hypothetical Protein no 0.65
11 mRNA_3006 11374 K03259 EIF4E translation initiation factor 4E no 0.65
12 mRNA_8446 16814 K01115 PLD1_2 phospholipase D1/2 no 0.65
13 mRNA_7440 15808 KOG0537 Cytochrome b5 no 0.64
14 mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 no 0.64
15 mRNA_3620 11988 K15777 DOPA 4,5-DOPA dioxygenase extradiol no 0.63
16 mRNA_2654 11022 K00864 glpK, GK glycerol kinase no 0.63
17 mRNA_7475 15843 K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein no 0.62
18 mRNA_1356 9724 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.61
19 mRNA_6179 14547 KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s) no 0.60
20 mRNA_2401 10769 HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300 no 0.60