Top cofit genes for mRNA_2191 from Rhodosporidium toruloides IFO0880

mRNA_2191 10559 : ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2544 10912 K00046 idnO gluconate 5-dehydrogenase no 0.83
2 mRNA_3206 11574 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.77
3 mRNA_216 8584 BLAST protein of choline transporter-like family [Rhodo... no 0.75
4 mRNA_1428 9796 HMMPfam-Protein of unknown function (DUF3237)-PF11578 no 0.75
5 mRNA_1094 9462 HMMPfam-Frag1/DRAM/Sfk1 family-PF10277 no 0.74
6 mRNA_607 8975 K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase no 0.74
7 mRNA_1451 9819 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 no 0.74
8 mRNA_4314 12682 Hypothetical Protein no 0.73
9 mRNA_7268 15636 Hypothetical Protein no 0.73
10 mRNA_133 8501 Hypothetical Protein no 0.73
11 mRNA_7909 16277 Hypothetical Protein no 0.72
12 mRNA_1539 9907 K13617 PPME1 protein phosphatase methylesterase 1 no 0.72
13 mRNA_8163 16531 HMMPfam-Domain of unknown function (DUF4505)-PF14956 no 0.71
14 mRNA_5473 13841 KOG2226 Proteins containing regions of low-complexity no 0.70
15 mRNA_6206 14574 K10524 NRK1_2 nicotinamide/nicotinate riboside kinase no 0.69
16 mRNA_5143 13511 K12763 SOK2 protein SOK2 no 0.68
17 mRNA_3953 12321 Hypothetical Protein no 0.68
18 mRNA_3630 11998 Hypothetical Protein no 0.67
19 mRNA_1328 9696 SUPERFAMILY--SSF82708 no 0.67
20 mRNA_3207 11575 Hypothetical Protein no 0.66