Top cofit genes for mRNA_2025 from Rhodosporidium toruloides IFO0880

mRNA_2025 10393 : SUPERFAMILY--SSF53474

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_337 8705 HMMPfam-Glycosyl hydrolases family 17-PF00332,SUPERFAMILY--SSF51445 no 0.77
2 mRNA_438 8806 Hypothetical Protein no 0.72
3 mRNA_3804 12172 Hypothetical Protein no 0.71
4 mRNA_441 8809 K13989 DERL2_3 Derlin-2/3 no 0.71
5 mRNA_7282 15650 HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556 no 0.69
6 mRNA_2462 10830 SUPERFAMILY--SSF52047 no 0.69
7 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.69
8 mRNA_3093 11461 Hypothetical Protein no 0.67
9 mRNA_2141 10509 SUPERFAMILY--SSF52047 no 0.67
10 mRNA_5611 13979 HMMPfam-Protein of unknown function (DUF2433)-PF10360 no 0.66
11 mRNA_1906 10274 KOG0627 Heat shock transcription factor no 0.66
12 mRNA_2553 10921 KOG2466 Uridine permease/thiamine transporter/allantoin transport no 0.66
13 mRNA_7769 16137 KOG2504 Monocarboxylate transporter no 0.66
14 mRNA_7974 16342 Hypothetical Protein no 0.66
15 mRNA_2182 10550 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 no 0.66
16 mRNA_2091 10459 KOG0254 Predicted transporter (major facilitator superfamily) no 0.65
17 mRNA_7325 15693 K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase no 0.64
18 mRNA_5606 13974 HMMPfam-Glycosyl hydrolase family 61-PF03443 no 0.64
19 mRNA_1928 10296 Hypothetical Protein no 0.64
20 mRNA_3391 11759 Hypothetical Protein no 0.64