Top cofit genes for mRNA_2000 from Rhodosporidium toruloides IFO0880

mRNA_2000 10368 : K09650 PARL, PSARL, PCP1 rhomboid-like protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1662 10030 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
2 mRNA_7170 15538 Hypothetical Protein no 0.79
3 mRNA_4724 13092 Hypothetical Protein no 0.75
4 mRNA_6033 14401 Hypothetical Protein no 0.75
5 mRNA_6464 14832 KOG1609 Protein involved in mRNA turnover and stability no 0.73
6 mRNA_5021 13389 K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7 no 0.73
7 mRNA_2383 10751 Hypothetical Protein no 0.73
8 mRNA_6276 14644 K12615 EDC3 enhancer of mRNA-decapping protein 3 no 0.72
9 mRNA_5172 13540 BLAST similar to An11g07040 [Aspergillus kawachii IFO 4308] no 0.71
10 mRNA_2830 11198 BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag... no 0.71
11 mRNA_8250 16618 K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase no 0.70
12 mRNA_7587 15955 HMMPfam-Protein of unknown function (DUF2413)-PF10310 no 0.69
13 mRNA_290 8658 HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473 no 0.68
14 mRNA_7763 16131 HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062 no 0.68
15 mRNA_5567 13935 K14394 ACP1 low molecular weight phosphotyrosine protein phosphatase no 0.67
16 mRNA_5252 13620 BLAST LPS-assembly protein LptD [Rhizoctonia solani] no 0.67
17 mRNA_6629 14997 KOG0538 Glycolate oxidase no 0.66
18 mRNA_2851 11219 SUPERFAMILY--SSF52047 no 0.66
19 mRNA_4526 12894 K12446 E2.7.1.46 L-arabinokinase no 0.65
20 mRNA_7530 15898 Hypothetical Protein no 0.65