Top cofit genes for mRNA_1862 from Rhodosporidium toruloides IFO0880

mRNA_1862 10230 : Interpro DNA replication factor Cdt1 C-terminal domain 0

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3113 11481 K11361 SPT20, ADA5 transcription factor SPT20 no 0.76
2 mRNA_1502 9870 HMMPfam-Fungal specific transcription factor domain-PF04082,SUPERFAMILY--SSF57701 no 0.73
3 mRNA_5597 13965 Hypothetical Protein no 0.72
4 mRNA_550 8918 KOG4391 Predicted alpha/beta hydrolase BEM46 no 0.71
5 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
6 mRNA_6376 14744 K14811 DBP3 ATP-dependent RNA helicase DBP3 no 0.69
7 mRNA_2325 10693 Hypothetical Protein no 0.69
8 mRNA_7187 15555 K00799 GST, gst glutathione S-transferase no 0.69
9 mRNA_3722 12090 K11251 H2A histone H2A no 0.69
10 mRNA_4953 13321 HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF01243,SUPERFAMILY--SSF50475 no 0.68
11 mRNA_7433 15801 K10356 MYO1 myosin I no 0.68
12 mRNA_2816 11184 HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785 no 0.68
13 mRNA_2960 11328 KOG2617 Citrate synthase no 0.67
14 mRNA_3128 11496 BLAST protein transporter [Pseudozyma hubeiensis SY62] no 0.67
15 mRNA_1582 9950 K01381 PEP4 saccharopepsin no 0.67
16 mRNA_5756 14124 HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.66
17 mRNA_2638 11006 SMART-heat shock factor-SM00415 no 0.66
18 mRNA_6920 15288 BLAST GTP binding protein 2 [Moniliophthora roreri MCA ... no 0.66
19 mRNA_3136 11504 KOG2615 Permease of the major facilitator superfamily no 0.66
20 mRNA_2650 11018 BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa] no 0.66