Top cofit genes for mRNA_1817 from Rhodosporidium toruloides IFO0880

mRNA_1817 10185 : HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2543 10911 Hypothetical Protein no 0.83
2 mRNA_7787 16155 Hypothetical Protein no 0.83
3 mRNA_5398 13766 K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic) no 0.82
4 mRNA_3955 12323 K02355 fusA, GFM, EFG elongation factor G no 0.82
5 mRNA_5382 13750 Hypothetical Protein no 0.81
6 mRNA_5985 14353 Hypothetical Protein no 0.81
7 mRNA_2424 10792 KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) no 0.81
8 mRNA_6123 14491 BLAST DNA polymerase [Rhizoctonia solani] no 0.79
9 mRNA_1777 10145 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.79
10 mRNA_1227 9595 KOG1318 Helix loop helix transcription factor EB no 0.78
11 mRNA_2614 10982 K18050 PRKCE novel protein kinase C epsilon type no 0.78
12 mRNA_414 8782 KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes no 0.77
13 mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 no 0.77
14 mRNA_6706 15074 K16261 YAT yeast amino acid transporter no 0.77
15 mRNA_1928 10296 Hypothetical Protein no 0.77
16 mRNA_1166 9534 KOG2533 Permease of the major facilitator superfamily no 0.76
17 mRNA_951 9319 K16261 YAT yeast amino acid transporter no 0.76
18 mRNA_2820 11188 HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777 no 0.75
19 mRNA_4791 13159 ProSiteProfiles-BTB domain profile.-PS50097 no 0.75
20 mRNA_2985 11353 KOG1203 Predicted dehydrogenase no 0.74